High-Memory Queues

Details on Jobs that Produced a Warning

As of Sun Apr 26 10:47:08 EDT 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
13369199.1    nf-alignSeqs_(1 campanam       mThM.q - 128.0G >>  37.312G -  34.295G  19.473G  28.7d   1.8d  99.6%    16/mthread
13368462.1    iqtree.75p.oct2 cerqueirat     lThM.q - 240.0G >>  30.251G -  30.066G  29.986G   6.1d   2.1d  23.6%    12/mthread
13260126.1    egapx           zhangy         lThM.q - 256.0G <  282.862G - 200.914G  15.158G  28.8d   4.0d  45.6%    16/mthread
13369430.1    sapdescript     woodh          lThM.q - 100.0G << 153.890G -   5.361G  70.921G   4.3d   1.2d  88.8%     4/mthread
13253690.1    phyluce4        vagac          lThM.q - 420.0G >> 133.769G -  74.386G   3.340G  59.2d   6.7d  87.8%    10/mthread
12795448.1    IQ_phy_cerrado  nevesk         lThM.q - 200.0G >>  73.070G -  17.145G  10.272G 511.7d  27.6d  61.7%    30/mthread
13332208.1    phynest_run     hinckleya      lThM.q -   8.0G >>   4.735G -   4.735G   4.632G   2.9d   2.9d  99.6%     1
13368283.1    iqtree.50p.oct2 cerqueirat     lThM.q - 240.0G >>  95.241G -  94.813G  33.705G  20.4d   2.2d  77.6%    12/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Sunday, 26-Apr-2026 10:52:25 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)