Details on Jobs in the High-Memory Queues that Produced a Warning

Details on Jobs that Produced a Warning

jobID.tID jobName user queue - mem_res max(vmem) - vmem avgmem cpu age eff. nslots ------------------------------------------------------------------------------------------------------------------------ 14418471.402 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.969G - 2.968G 2.812G 16.4h 16.4h 99.6% 1 14418471.411 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.970G - 2.969G 2.787G 13.4h 13.5h 99.6% 1 14418471.413 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.975G - 2.974G 2.783G 12.9h 12.9h 99.6% 1 14418471.415 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.766G 12.0h 12.1h 99.6% 1 14418471.416 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.973G - 2.972G 2.815G 11.8h 11.8h 99.6% 1 14418471.417 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.971G - 2.970G 2.806G 11.6h 11.6h 99.6% 1 14418471.418 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.973G - 2.972G 2.786G 11.3h 11.4h 99.6% 1 14418471.422 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.974G - 2.974G 2.726G 10.4h 10.5h 99.7% 1 14418471.427 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.974G - 2.974G 2.766G 9.9h 10.0h 99.5% 1 14418471.430 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.813G 9.6h 9.7h 99.6% 1 14418471.431 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.973G - 2.972G 2.818G 9.4h 9.5h 99.5% 1 14418471.432 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.823G 9.4h 9.4h 99.7% 1 14418471.433 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.970G - 2.969G 2.810G 9.3h 9.3h 99.5% 1 14418471.434 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.725G 9.1h 9.1h 99.6% 1 14418471.435 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.806G 8.8h 8.8h 99.5% 1 14418471.436 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.963G - 2.962G 2.736G 8.2h 8.2h 99.6% 1 14418471.437 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.973G - 2.972G 2.801G 8.1h 8.1h 99.6% 1 14418471.438 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.975G - 2.974G 2.653G 8.0h 8.0h 99.5% 1 14418471.439 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.975G - 2.974G 2.716G 7.9h 7.9h 99.4% 1 14418471.440 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.733G 7.7h 7.7h 99.6% 1 14418471.441 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.971G - 2.970G 2.738G 7.6h 7.7h 99.2% 1 14418471.442 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.975G - 2.975G 2.740G 7.5h 7.5h 99.6% 1 14418471.443 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.971G - 2.971G 2.716G 7.4h 7.4h 99.5% 1 14418471.444 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.974G - 2.974G 2.680G 7.1h 7.2h 99.4% 1 14418471.445 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.974G - 2.973G 2.772G 7.0h 7.0h 99.3% 1 14418471.446 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.970G - 2.969G 2.695G 6.9h 6.9h 99.7% 1 14418471.447 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.970G - 2.969G 2.710G 6.8h 6.8h 99.5% 1 14418471.448 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.692G 6.6h 6.6h 99.4% 1 14418471.449 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.757G 6.6h 6.6h 99.4% 1 14418471.450 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.972G - 2.971G 2.752G 6.4h 6.4h 99.5% 1 14418471.451 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.974G - 2.974G 2.694G 6.4h 6.4h 99.4% 1 14418471.452 SRR_16S-to-Gree palmerem mThM.q - 300.0G >> 2.973G - 2.971G 2.747G 6.1h 6.1h 99.6% 1 14423581.1 assT023 peresph mThM.q - 120.0G >> 71.472G - 1.142G 29.269G 25.5h 1.1d 15.7% 6/mthread 14421513.1 ass04 peresph mThM.q - 60.0G > 48.356G - 0.463G 14.141G 2.3d 2.9d 13.2% 6/mthread 14424935.1 assT089max peresph mThM.q - 300.0G >> 143.511G - 2.598G 61.740G 1.8d 17.5h 24.4% 10/mthread 14421521.1 ass12 peresph mThM.q - 60.0G >> 33.515G - 0.338G 12.623G 2.8d 2.9d 16.0% 6/mthread 14423579.1 assId009 peresph mThM.q - 120.0G >> 72.634G - 0.752G 30.226G 24.6h 1.1d 15.1% 6/mthread 14421523.1 ass14 peresph mThM.q - 60.0G > 48.421G - 0.369G 14.272G 3.3d 2.9d 18.8% 6/mthread 14421504.1 ass01 peresph mThM.q - 60.0G >> 36.499G - 1.796G 14.435G 2.3d 2.9d 13.2% 6/mthread 14423642.1 Full_Rep1 peresph mThM.q - 120.0G >> 85.613G - 0.658G 28.764G 20.1h 1.1d 12.6% 6/mthread 14421512.1 ass03 peresph mThM.q - 60.0G >> 25.487G - 0.338G 9.469G 2.9d 2.9d 16.8% 6/mthread 14423643.1 Full2_Rep2 peresph mThM.q - 120.0G >> 51.345G - 1.152G 19.587G 29.8h 1.1d 18.7% 6/mthread 14423580.1 assId051 peresph mThM.q - 120.0G >> 73.376G - 4.371G 30.567G 35.9h 1.1d 22.1% 6/mthread 14419930.1 Step3_ribodetec bourkeb mThM.q - 256.0G >> 183.365G - 180.441G 17.596G 26.6d 4.0d 82.9% 8/mthread 14421515.1 ass06 peresph mThM.q - 60.0G > 50.667G - 0.318G 14.227G 2.4d 2.9d 13.8% 6/mthread 14424934.1 assT185max peresph mThM.q - 300.0G >> 170.488G - 3.049G 70.689G 2.6d 17.6h 36.0% 10/mthread 14422244.1 ass11rep peresph mThM.q - 120.0G > 113.745G - 0.346G 25.626G 2.8d 2.1d 21.9% 6/mthread 14425384.1 hifiasm_Kandula pradon mThM.q - 12.0G << 53.137G - 52.986G 50.679G 6.4h 0.4h 22.9% 64/mthread 14421517.1 ass08 peresph mThM.q - 60.0G >> 43.834G - 0.871G 13.961G 2.8d 2.9d 15.7% 6/mthread 14418418.1 bpp_A11_williso figueiroh mThM.q - 128.0G >> 0.273G - 0.273G 0.255G 7.2d 7.2d 12.5% 8/mthread 14425224.1 assemble-spades lealc mThM.q - 200.0G >> 40.689G - 12.356G 14.903G 25.3h 2.2h 71.8% 16/mthread 14421516.1 ass07 peresph mThM.q - 60.0G >> 43.039G - 0.668G 13.986G 2.2d 2.9d 12.5% 6/mthread 14421511.1 ass02 peresph mThM.q - 60.0G > 53.762G - 0.377G 10.910G 3.1d 2.9d 17.4% 6/mthread 14424969.1 Step4_de_novo_a bourkeb mThM.q - 256.0G >> 200.772G - 7.195G 4.125G 19.1h 10.1h 23.8% 8/mthread 14422996.1 loco-pipe-N187- longk mThM.q - 640.0G >> 138.825G - 17.469G 11.478G 25.5d 1.9d 41.8% 32/mthread 14421518.1 ass09 peresph mThM.q - 60.0G >> 39.513G - 0.310G 11.647G 4.2d 2.9d 24.0% 6/mthread 14405067.1 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 25.539G - 25.539G 25.073G 13.0d 13.1d 99.8% 1 14405069.3 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 27.673G - 27.673G 27.124G 13.0d 13.1d 99.8% 1 14405075.9 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 19.172G - 19.172G 18.672G 13.0d 13.1d 99.8% 1 14424971.1 BRNO_sfs2 byerlyp lThM.q - 100.0G >> 54.386G - 54.339G 52.836G 25.7h 9.9h 51.7% 5/mthread 14405252.55 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 61.271G - 61.271G 60.436G 12.8d 12.8d 99.7% 1 14405246.107 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 49.467G - 49.375G 48.724G 12.8d 12.8d 99.7% 1 14405257.107 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 49.464G - 49.464G 48.810G 12.8d 12.8d 99.7% 1 14405253.64 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 52.742G - 52.742G 52.059G 12.8d 12.8d 99.7% 1 14423599.1 sapdescript santosbe lThM.q - 320.0G >> 51.437G - 0.649G 14.332G 27.5h 1.1d 12.7% 8/mthread 14405234.107 CJS_nbraw_nc suttonm lThM.q - 64.0G >> 49.529G - 49.438G 48.751G 12.8d 12.9d 99.7% 1 14422897.2 earlgrey zhangy lThM.q - 192.0G >> 16.424G - 1.301G 1.180G 21.0d 1.9d 91.2% 12/mthread 14422897.11 earlgrey zhangy lThM.q - 192.0G > 177.728G - 3.415G 2.923G 9.9d 1.9d 43.1% 12/mthread 14405240.35 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 64.949G - 64.949G 64.091G 12.8d 12.8d 99.7% 1 14405242.64 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 52.741G - 52.741G 52.063G 12.8d 12.8d 99.7% 1 14424975.1 run_S5 szieba lThM.q - 1.0G << 138.327G - 138.327G 2.702G 15.8d 9.4h 80.4% 50/mthread 14423601.1 sapdescript santosbe lThM.q - 320.0G >> 21.712G - 0.899G 9.562G 15.2h 1.1d 7.0% 8/mthread 14423623.1 sapdescript santosbe lThM.q - 320.0G >> 43.863G - 0.898G 20.329G 23.4h 21.3h 13.7% 8/mthread 14425043.1 spades_BS_DFG_7 santosbe lThM.q - 96.0G >> 39.512G - 15.141G 18.916G 24.4h 3.4h 88.7% 8/mthread 14424970.1 sote_sfs2 byerlyp lThM.q - 100.0G >> 55.575G - 54.670G 47.315G 26.4h 9.9h 53.1% 5/mthread 14405142.85 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 26.225G - 26.225G 25.753G 13.0d 13.1d 99.7% 1 14405159.104 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 34.124G - 34.124G 27.358G 13.0d 13.1d 99.7% 1 14423619.1 sapdescript santosbe lThM.q - 320.0G >> 24.030G - 0.648G 11.921G 15.8h 22.5h 8.8% 8/mthread 14423607.1 sapdescript santosbe lThM.q - 320.0G >> 23.511G - 0.899G 8.465G 14.2h 1.1d 6.8% 8/mthread 14405165.110 CJS_nbraw_nc suttonm lThM.q - 48.0G >> 37.120G - 37.120G 36.550G 13.0d 13.1d 99.6% 1 14405250.35 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 64.886G - 64.886G 64.119G 12.8d 12.8d 99.7% 1 14424973.1 BRNO_sfs2 byerlyp lThM.q - 100.0G >> 54.386G - 51.197G 52.970G 27.2h 9.5h 57.0% 5/mthread 14405247.108 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 57.371G - 57.371G 56.680G 12.8d 12.8d 99.7% 1 14405256.100 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 53.216G - 53.216G 52.501G 12.8d 12.8d 99.7% 1 14423586.1 sapdescript santosbe lThM.q - 320.0G >> 32.265G - 0.899G 11.104G 14.0h 1.1d 6.5% 8/mthread 14423602.1 sapdescript santosbe lThM.q - 320.0G >> 32.792G - 1.149G 14.050G 14.7h 1.1d 6.8% 8/mthread 14405284.64 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 52.866G - 52.866G 52.032G 12.6d 12.6d 99.7% 1 14405288.100 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 53.216G - 53.216G 52.462G 12.6d 12.6d 99.8% 1 14405289.107 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 49.531G - 49.437G 48.684G 12.6d 12.6d 99.8% 1 14405281.35 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 64.949G - 64.949G 63.931G 12.6d 12.6d 99.8% 1 14405290.108 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 57.433G - 57.433G 56.531G 12.6d 12.6d 99.8% 1 14423588.1 sapdescript santosbe lThM.q - 320.0G >> 35.132G - 0.645G 15.189G 33.6h 1.1d 15.5% 8/mthread 14405283.55 CJS_nbraw_nc suttonm lThM.q - 96.0G >> 61.930G - 61.852G 60.902G 12.6d 12.6d 99.8% 1 14425215.1 hifi63_pa_YGG05 graujh uTxlM.rq - 1.465T >> 101.291G - 101.104G 77.199G 4.3d 2.3h 70.6% 64/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Thursday, 18-Jun-2026 13:01:29 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)