High-Memory Queues

Details on Jobs that Produced a Warning

As of Mon Mar 23 08:17:06 EDT 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
12780218.1    m_08_sentinel_r xuj            mThM.q - 300.0G >>  42.784G -  27.892G  19.463G   8.0h   8.4h  95.8%     1
12771848.1    ratestools      willishr       mThM.q -  40.0G << 158.024G -  78.269G  17.310G   9.7d   2.7d  60.6%     6/mthread
12781665.1    spades_HG209_co santosbe       lThM.q -  96.0G >>  25.753G -   4.153G  13.053G   7.6h   1.1h  86.0%     8/mthread
12781667.1    spades_HG211_co santosbe       lThM.q -  96.0G >>  22.477G -   4.110G  10.411G   7.4h   1.1h  84.0%     8/mthread
12190422.1    stairwayAZ.job  byerlyp        lThM.q -  20.0G >>   3.408G -   3.408G   3.372G  34.9d  34.9d  19.9%     5/mthread
12781664.1    spades_HG208_gi santosbe       lThM.q -  96.0G >>  26.221G -   4.276G  12.623G   7.4h   1.1h  84.5%     8/mthread
12781666.1    spades_HG210_in santosbe       lThM.q -  96.0G >>  37.848G -  22.287G  19.754G   7.8h   1.1h  89.0%     8/mthread
12781670.1    spades_HG214_gi santosbe       lThM.q -  96.0G >>  25.423G -   1.832G  12.715G   7.5h   1.1h  86.1%     8/mthread
12781671.1    AlignFasta      santosbe       lThM.q - 200.0G >> 119.626G -  98.820G   1.841G  21.0h   1.1h  96.9%    20/mthread
12781668.1    spades_HG212_co santosbe       lThM.q -  96.0G >>  24.250G -   8.832G  13.177G   7.6h   1.1h  86.8%     8/mthread
12781669.1    spades_HG213_pu santosbe       lThM.q -  96.0G >>  37.216G -  21.694G  17.940G   7.7h   1.1h  86.9%     8/mthread
12195552.1    stairwayNE.job  byerlyp        lThM.q -  20.0G >>   3.472G -   3.472G   3.427G  34.7d  34.8d  19.9%     5/mthread
12198833.1    stairwayCAR.job byerlyp        lThM.q -  20.0G >>   3.472G -   3.472G   3.427G  33.5d  33.9d  19.8%     5/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Monday, 23-Mar-2026 08:21:15 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)