High-Memory Queues

Details on Jobs that Produced a Warning

As of Thu Jan 29 08:37:05 EST 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
11806084.1    Step1_trim_galo bourkeb        mThM.q - 256.0G >>   3.920G -   3.845G   0.901G  10.7h   2.3h  56.7%     8/mthread
11806092.1    MitoFinder      bourkeb        mThM.q - 800.0G >>  34.142G -  33.697G   1.457G  11.0h   1.1h  61.4%    16/mthread
11804058.1    drep_hybrids_mp campanam       mThM.q -  64.0G >>  18.765G -  18.573G   9.408G   5.9d   5.7d  13.1%     8/mthread
11805589.1    BRNOLDfilter    byerlyp        lThM.q -  50.0G >>   7.822G -   7.812G   5.214G  24.8h   1.1d  19.6%     5/mthread
11805596.1    ROSTLDfilter    byerlyp        lThM.q -  50.0G >>  11.403G -  11.403G   4.094G  24.5h   1.0d  19.6%     5/mthread
11806070.1    iqtree_caenos_5 gouldingt      lThM.q - 160.0G >>  18.639G -  13.936G  14.631G   1.7d   5.6h  89.8%     8/mthread
11805854.1    iqtree_caenos_5 gouldingt      lThM.q - 160.0G >>  18.576G -  15.384G  15.922G   5.0d  17.6h  85.0%     8/mthread
11805851.1    iqtree_caenos_5 gouldingt      lThM.q - 160.0G >>  18.382G -  16.837G  15.043G   5.5d  17.7h  92.6%     8/mthread
11806036.1    bootIQ_Rel90    peresph        lThM.q -  16.0G >>   4.058G -   4.058G   4.034G  12.0h  12.0h  12.5%     8/mthread
11801118.1    angsd_strict    uribeje        uThM.q - 200.0G >> 102.247G - 101.706G  68.143G  10.7d   9.6d  13.9%     8/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Thursday, 29-Jan-2026 08:41:17 EST with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)