High-Memory Queues
Details on Jobs that Produced a Warning
As of Fri Mar 29 07:07:06 EDT 2024
jobID.tID jobName user queue - mem_res max(vmem) - vmem avgmem cpu age eff. nslots
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24646007.1 Nat_6_3_getorga brandaor mThM.q - 96.0G >> 31.404G - 24.955G 14.245G 21.2h 21.4h 12.4% 8/mthread
24646011.1 Nat_7_2_getorga brandaor mThM.q - 96.0G >> 32.168G - 24.536G 13.580G 21.3h 21.4h 12.4% 8/mthread
24642157.1 Hym70p_sym zhangy mThM.q - 320.0G >> 4.778G - 4.449G 4.426G 52.2d 6.8d 48.0% 16/mthread
24643519.1 genetrees zhangy mThM.q - 480.0G >> 27.411G - 27.411G 21.460G 83.5d 3.5d 99.9% 24/mthread
24646009.1 Nat_6_5_getorga brandaor mThM.q - 96.0G >> 40.987G - 25.888G 13.826G 21.3h 21.4h 12.5% 8/mthread
24642688.1 symGB237t_60ppS sossajef lThM.q - 150.0G >> 31.596G - 31.533G 30.430G 81.5d 4.4d 93.3% 20/mthread
24646058.1 bcftools1.job parkerld lThM.q - 250.0G >> 0.623G - 0.576G 0.326G 20.0h 16.6h 120.4% 1
24642689.1 GB237t_60pSWSCE sossajef lThM.q - 150.0G >> 38.302G - 38.168G 36.296G 81.2d 4.4d 93.0% 20/mthread
24642228.3 ngsLD boltonp lThM.q - 96.0G >> 37.947G - 37.234G 37.121G 47.8d 6.7d 59.8% 12/mthread
22914883.1 ngsLD_prune_gra connellym lThM.q - 400.0G >> 4.196G - 4.163G 4.044G 34.0d 29.9d 56.9% 2/mthread
24642793.1 earl_grey_2 myerse lThM.q - 600.0G >> 30.728G - 10.403G 0.331G 29.6d 3.7d 39.8% 20/mthread
22900132.1 BeastRep5 kressleinr uThM.q - 64.0G >> 18.630G - 18.630G 18.409G 340.5d 41.8d 81.4% 10/mthread
22928731.1 masurca_2024.sh chaks uTxlM.rq - 1.914T >> 669.945G - 441.256G 402.698G 56.0d 27.7d 5.0% 40/mthread
A warning is generated if either:
• too much or too little memory is reserved:
mem_res versus max(vmem); or
• the job efficiency is too low or is too high.
Click on the link under the jobID.tID
heading to view the job's corresponding graph.
The quantity
mem_res is the amount of memory reserved for the job, while
max(vmem) is the maximum amount of memory a job has used (so far);
to optimize the cluster's memory usage, these two numbers should be similar.
The job efficiency, eff., is the amount of CPU used so far divided by the product of the
age by the number of slots.
• A low efficiency means that the job is not using all the allocated CPUs (slots);
• a value above 100% means that the job is using more CPUs cycles
(threads) than the requested number of slots (nslots).
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This page was last updated on
Friday, 29-Mar-2024 07:11:22 EDT
with mk-web-page.pl ver. 6.3/1 (Dec 2023/SGK)
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