High-Memory Queues

Details on Jobs that Produced a Warning

As of Sat Aug 1 05:47:38 EDT 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
15302719.1    krakenuniq      johnsonsj      mThM.q - 450.0G >  412.193G - 386.568G 332.750G   3.0d   1.7d  18.2%    10/mthread
15302149.1    assemble-spades lealc          mThM.q - 200.0G >> 127.866G -   4.952G   9.020G  35.8d   2.6d  86.1%    16/mthread
15298719.1    mf_trm2         wirshingh      mThM.q -  72.0G >   68.102G -   2.205G   2.877G  16.9d   4.8d  39.3%     9/mthread
15303578.1    ROST_angsd      byerlyp        lThM.q - 150.0G >>   2.276G -   2.225G   1.639G  22.9h  22.4h  10.2%    10/mthread
15303616.1    earlgrey        zhangy         lThM.q - 192.0G >>  16.528G -   3.990G   1.484G   6.8d  19.4h  70.2%    12/mthread
15303616.2    earlgrey        zhangy         lThM.q - 192.0G >>   8.379G -   3.163G   1.388G   7.1d  19.4h  72.7%    12/mthread
15303616.3    earlgrey        zhangy         lThM.q - 192.0G >>  10.443G -   2.128G   1.471G   6.4d  19.4h  65.4%    12/mthread
15303582.1    brno_angsd      byerlyp        lThM.q - 150.0G >>   1.284G -   1.144G   1.086G  22.4h  22.4h  10.0%    10/mthread
15293594.1    raxml_hmem      athalappila    lThM.q - 120.0G >>  71.743G -  71.276G  70.889G 340.3d   8.6d  98.6%    40/mthread
15303625.1    earlgrey        zhangy         lThM.q - 192.0G >>  46.895G -   1.454G   1.781G   9.6d  19.0h 100.5%    12/mthread
15301656.3    earlgrey        zhangy         lThM.q - 192.0G >>  43.915G -   2.545G   1.200G  30.9d   2.9d  88.3%    12/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Saturday, 01-Aug-2026 05:51:09 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)