High-Memory Queues

Details on Jobs that Produced a Warning

As of Fri Jul 10 10:17:13 EDT 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
14966566.1    clNo_1000       peresph        mThM.q -  20.0G >>   9.255G -   8.642G   8.579G  35.2d   3.5d  99.4%    10/mthread
14969201.1    mf_trimmedreads wirshingh      mThM.q -  72.0G >>  34.389G -   1.832G   2.526G   6.1d   1.7d  40.2%     9/mthread
14966565.1    clcor1000       peresph        mThM.q -  20.0G >>   8.641G -   8.641G   7.151G  35.2d   3.5d  99.5%    10/mthread
14969493.1    run_S5          szieba         lThM.q -   1.0G << 139.611G - 139.611G   2.723G  52.4d   1.3d  80.0%    50/mthread
14991183.1    AlignFasta      nevesk         lThM.q - 400.0G >> 141.503G - 138.497G   0.645G  12.1d  14.8h  98.6%    20/mthread
14966194.92   CJS_nbraw_nc    suttonm        lThM.q - 256.0G >>  91.596G -  91.596G  88.139G   3.8d   3.8d  99.6%     1
14969492.1    run_S5          szieba         lThM.q -   1.0G << 139.303G - 139.303G   2.722G  43.5d   1.3d  65.9%    50/mthread
14969631.1    raxml-$TASK_ID  gallego-narb   lThM.q - 500.0G >>   3.151G -   3.133G   3.117G  19.1d  23.1h  99.2%    20/mthread
14966193.83   CJS_nbraw_nc    suttonm        lThM.q - 256.0G >>  82.247G -  82.247G  79.087G   3.8d   3.8d  99.4%     1
14966190.55   CJS_nbraw_nc    suttonm        lThM.q - 256.0G >>  61.426G -  61.426G  59.400G   3.8d   3.8d  99.5%     1
14969494.1    run_S5          szieba         lThM.q -   1.0G << 139.286G - 139.286G   2.722G  44.9d   1.3d  68.7%    50/mthread
14970176.1    raxml-$TASK_ID  gallego-narb   lThM.q - 500.0G >>   1.858G -   1.852G   1.831G  18.5d  22.3h  99.3%    20/mthread
14969489.1    run_S5          szieba         lThM.q -   1.0G << 141.635G - 141.635G   2.762G  51.5d   1.3d  77.5%    50/mthread
14966188.2    CJS_nbraw_nc    suttonm        lThM.q - 256.0G >> 123.335G - 123.335G 118.407G   3.8d   3.8d  99.5%     1
14966192.73   CJS_nbraw_nc    suttonm        lThM.q - 256.0G >>  47.226G -  47.226G  45.733G   3.8d   3.8d  99.7%     1
14966189.35   CJS_nbraw_nc    suttonm        lThM.q - 256.0G >>  64.948G -  64.948G  62.072G   3.8d   3.8d  99.7%     1

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Friday, 10-Jul-2026 10:21:11 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)