High-Memory Queues

Details on Jobs that Produced a Warning

As of Thu Jul 30 10:07:11 EDT 2026 
   jobID.tID  jobName         user           queue  - mem_res  max(vmem) -   vmem     avgmem   cpu    age    eff. nslots
------------------------------------------------------------------------------------------------------------------------
15302488.1    blast           parras         sThM.q - 900.0G >> 487.315G - 487.315G 252.974G  13.8h   0.9h  50.1%    30/mthread
15302149.1    assemble-spades lealc          mThM.q - 200.0G >> 127.866G -   0.702G  16.895G   9.9d  18.6h  79.4%    16/mthread
15298719.1    mf_trm2         wirshingh      mThM.q -  72.0G >   68.102G -   3.035G   2.925G  10.4d   2.9d  39.3%     9/mthread
15301656.1    earlgrey        zhangy         lThM.q - 192.0G >>  29.135G -   0.696G   1.565G   5.7d   1.1d  43.0%    12/mthread
15301656.2    earlgrey        zhangy         lThM.q - 192.0G >>   7.794G -   3.532G   1.561G   8.8d   1.1d  66.9%    12/mthread
15301656.3    earlgrey        zhangy         lThM.q - 192.0G >>  43.915G -   2.545G   1.143G  11.0d   1.1d  83.9%    12/mthread
15301656.5    earlgrey        zhangy         lThM.q - 192.0G >>   8.165G -   2.709G   1.623G   9.3d   1.1d  70.9%    12/mthread
15301656.6    earlgrey        zhangy         lThM.q - 192.0G >>   9.698G -   4.014G   1.579G   9.2d   1.1d  70.0%    12/mthread
15301646.1    ROST_angsd      byerlyp        lThM.q - 150.0G >>  82.472G -  82.472G  20.200G   1.8d   1.2d  15.0%    10/mthread
15293594.1    raxml_hmem      athalappila    lThM.q - 120.0G >>  71.743G -  71.743G  70.786G 268.6d   6.8d  98.6%    40/mthread
15300160.9    imaging_array   jmichail       uThM.q -  70.0G >>  53.319G -  51.510G  46.757G  22.7h  18.0h 126.4%     1
15300160.12   imaging_array   jmichail       uThM.q -  70.0G >   65.919G -  62.304G  52.428G  23.3h   5.6h 420.4%     1
15300160.13   imaging_array   jmichail       uThM.q -  70.0G >   59.855G -  58.238G  44.401G  15.5h   1.9h 815.1%     1
15300040.1    Hifi_P2_HICdata gonzalezv    uTxlM.rq - 1.758T >>  31.174G -  10.299G  11.052G  19.5d   1.6d  13.2%    90/mthread

A warning is generated if either: • too much or too little memory is reserved: mem_res versus max(vmem); or • the job efficiency is too low or is too high. Click on the link under the jobID.tID heading to view the job's corresponding graph.

The quantity mem_res is the amount of memory reserved for the job, while max(vmem) is the maximum amount of memory a job has used (so far); to optimize the cluster's memory usage, these two numbers should be similar.

The job efficiency, eff., is the amount of CPU used so far divided by the product of the age by the number of slots. • A low efficiency means that the job is not using all the allocated CPUs (slots); • a value above 100% means that the job is using more CPUs cycles (threads) than the requested number of slots (nslots).

This page was last updated on Thursday, 30-Jul-2026 10:11:59 EDT with mk-web-page.pl ver. 7.3/1 (Oct 2025/SGK)